Department of Applied Mathematics & Physics, Kyoto University

Technical Report 2021-002 (September 3, 2021)

Adjustive Linear Regression and Its Application to the Inverse QSAR
by Jianshen Zhu, Kazuya Haraguchi, Hiroshi Nagamochi, and Tatsuya Akutsu

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In this paper, we propose a new machine learning method, called adjustive linear regression, which can be regarded as an ANN on an architecture with an input layer and an output layer of a single node, wherein an error function is minimized by choosing not only weights of the arcs but also an activation function at each node in the two layers simultaneously. Under some conditions, such a minimization can be formulated as a linear program (LP) and a prediction function with adjustive linear regression is obtained as an optimal solution to the LP. We apply the new machine learning method to a framework of inferring a chemical compound with a desired property (i.e., inverse QSAR). From the results of our computational experiments, we observe that a prediction function constructed by adjustive linear regression for some chemical properties drastically outperforms that by Lasso linear regression.